Search database by Expression / Cell line / Tissue
Query database by expression data
Enter gene symbols to get expression profile
Here, you can enter gene symbols of interest to get an overview of their measured expressions across three cancer cell lines (Cellminer - NCI-60 panel, CCLE and CoSMIC).
Query database by cell line input
Search for specific cell line
Displaying all information for one cancer cell line or a tissue type is enabled here. Information about the cancer cell line's tissue, most effective drugs, mutations and similar cell lines is provided.
e.g. M14, ACHN, OVCAR_4
-- Please choose --
Aero Digestive Tract
Central Nervous System
Colon (large Intestine)
Query database with your own data
Paste your expression data here:
Please enter your list as following: every line should consist of one affy probe name or gene symbol with an expression value tab seperated.
Preparation of data:
External data has to be normalized and log2 transformed to compare it with the database's cancer cell lines. Expression profiles of the cancer cell lines stored in CancerResource have been performed on HG-U133A and HG-U133Plus2 Affymetrix microarray chips.
The most similar cancer cell lines compared to your query data are calculated.
Affy probe names
(Cell-line: REH, control GEO:
Warning: if the amount of genes exceeds 100 genes the calculation may take up to 10 minutes.
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